CDS
| Accession Number | TCMCG006C93714 |
| gbkey | CDS |
| Protein Id | XP_013676367.1 |
| Location | complement(join(17504220..17504396,17504506..17504694,17504777..17505352,17505699..17505882,17505962..17506095,17506179..17506306,17506405..17506414)) |
| Gene | LOC106381052 |
| GeneID | 106381052 |
| Organism | Brassica napus |
Protein
| Length | 465aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA293435 |
| db_source | XM_013820913.2 |
| Definition | E3 ubiquitin-protein ligase rnf8-B-like isoform X1 [Brassica napus] |
EGGNOG-MAPPER Annotation
| COG_category | DKLT |
| Description | Zinc finger (C3HC4-type RING finger) family protein BRCT domain-containing protein |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction |
R00274
[VIEW IN KEGG] R07034 [VIEW IN KEGG] R07035 [VIEW IN KEGG] |
| KEGG_rclass |
RC00011
[VIEW IN KEGG] RC00982 [VIEW IN KEGG] |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko01000 [VIEW IN KEGG] |
| KEGG_ko |
ko:K00432
[VIEW IN KEGG] |
| EC |
1.11.1.9
[VIEW IN KEGG]
[VIEW IN INGREDIENT] |
| KEGG_Pathway |
ko00480
[VIEW IN KEGG] ko00590 [VIEW IN KEGG] ko04918 [VIEW IN KEGG] map00480 [VIEW IN KEGG] map00590 [VIEW IN KEGG] map04918 [VIEW IN KEGG] |
| GOs | - |
Sequence
| CDS: ATGGGTTTCATAGGTATGGAAAACGTGGTTGCAACTGTGAGTGGCTATCACGGCTCGGAGAGGTTCAAGCTCATCAAGCTTATCTCCCTTTCTGGTGCTAGTTATGTCGGCGCTATGTCAAGATCCATTACCCATTTGGTTTGCTGGAAATTCGAAGGCAAAAAGTACCATCTTGCTAACAAGTTCAATACAATTGTAGTCAATCATCAATGGGTGGAAGCTTGCATAAGGGAAGGCAGACGAGTTTCCGAGGCTCCTTATACCTTTGAAAGTGGGGAAGAGGTTGGTCCTTTGATGGTTGAACTTCCTGCGGATTCTGGAGAAGCTAAAGTCACTAAGAAGGCCAATAATCCTGCTGATACTTTTGATAAATACTTTTCTAACGGTGAAGAAAGCAGGAGGAGCCGCCGCACTTCTGAGCTTTCCACTTGGATGGACTCTGTCTTGTTGAAAGAGAAAAATACAGAATCAACCAGACACTCAGTGAGACTGAGAACAAAGAGGCCAAGTAATATTTTTGAAGACAAGGAATACACTTGCGTGGCGGAATCTTCACGGAAAGGAAAGAGGCGGTTAGTAAAGCCACGCTCTTCCAGAAACCTTATCGACCTTGATTCTGATGGGGAATCTGATAGTAACTTTCATGACATTCCTGACAGGCAACAAAGAAAGTCTCAGGATCCTAGGGAGCTTAATGATGAAAATGTGGAGGACTGTGTTTTAGAACAAGGAGAAACATCAGCTCGTGAACATCCCCGAGACTCTACAACACAAGACTGGGCTGCGGATGAAATAGAGGAGTCTGAGAATTGGAATCATTCAGCTGTATTTAAACGCCCGAGATCAATCAATGCAGAGAAATCAAACTTCAACAAGCCCGATTCAAGAGAAGAAGAGACGGAAGCAACTAAGATGGTCTCTGCGCAGGTTTCTTGTGTCATATGCTGGACGGGGTTCAGTTCCACTAGAGGTATTCTCCCTTGCGGCCACAGGTTTTGTTATTCCTGCATCCAGCAATGGGTAGACCGTTTGGTTTCTGAAAGAAAGAAGACAACATGTCCATTGTGCAAGTTCAGTTTCGTAACTATCACAAAGATAGAAGACGCAGGATCTTCTGATCAAAAGATATATTCACAAACAGTCCCTGACCCATCTTCAACAAACAACTCTCTTGTAGTACTCCCTGAAGAAGGAGAAGAAAGACAAGGTTTCAATCCACTGACTCGAGCTTCAGCGTGTGGTAGATGCTCCCTCAGTGAACCAGTTGATCTTCTCATAAGATGTCACATCTGCAACTTCCGGCGGATCCATACTTATTGTTTAGACCCTTATCTGGTTCCTTGGACCTGCAACCATTGCAATGATCTTCAGATGCTTTACCATCGTCGTGGCTACTAA |
| Protein: MGFIGMENVVATVSGYHGSERFKLIKLISLSGASYVGAMSRSITHLVCWKFEGKKYHLANKFNTIVVNHQWVEACIREGRRVSEAPYTFESGEEVGPLMVELPADSGEAKVTKKANNPADTFDKYFSNGEESRRSRRTSELSTWMDSVLLKEKNTESTRHSVRLRTKRPSNIFEDKEYTCVAESSRKGKRRLVKPRSSRNLIDLDSDGESDSNFHDIPDRQQRKSQDPRELNDENVEDCVLEQGETSAREHPRDSTTQDWAADEIEESENWNHSAVFKRPRSINAEKSNFNKPDSREEETEATKMVSAQVSCVICWTGFSSTRGILPCGHRFCYSCIQQWVDRLVSERKKTTCPLCKFSFVTITKIEDAGSSDQKIYSQTVPDPSSTNNSLVVLPEEGEERQGFNPLTRASACGRCSLSEPVDLLIRCHICNFRRIHTYCLDPYLVPWTCNHCNDLQMLYHRRGY |